Bullet Blender Publications: Nucleotide Extraction

Zheng, Y., Xie, J., Huang, X., Dong, J., Park, M. S., & Chan, W. K. (2016). Binding studies using Pichia pastoris expressed human aryl hydrocarbon receptor and aryl hydrocarbon receptor nuclear translocator proteins. Protein Expression and Purification, 122, 72–81. https://doi.org/10.1016/j.pep.2016.02.011

Leach, M. D., Farrer, R. A., Tan, K., Miao, Z., Walker, L. A., Cuomo, C. A., Wheeler, R. T., Brown, A. J. P., Wong, K. H., & Cowen, L. E. (2016). Hsf1 and Hsp90 orchestrate temperature-dependent global transcriptional remodelling and chromatin architecture in Candida albicans. Nature Communications, 7, 11704. https://doi.org/10.1038/ncomms11704

Thangaraj, S. R., McCulloch, G. A., Subbarayalu, M., Subramaniam, C., & Walter, G. H. (2016). Development of microsatellite markers and a preliminary assessment of population structuring in the rice weevil, Sitophilus oryzae (L.). Journal of Stored Products Research, 66, 12–17. https://doi.org/10.1016/j.jspr.2015.12.005

Masterson, L., Winder, D. M., Ball, S. L. R., Vaughan, K., Lehmann, M., Scholtz, L.-U., Sterling, J. C., Sudhoff, H. H., & Goon, P. K. C. (2016). Molecular analyses of unselected head and neck cancer cases demonstrates that human papillomavirus transcriptional activity is positively associated with survival and prognosis. BMC Cancer, 16, 367. https://doi.org/10.1186/s12885-016-2398-7

Collas, M., Becking, T., Delpy, M., Pflieger, M., Bohn, P., Reynolds, J., & Grandjean, F. (2016). Monitoring of white-clawed crayfish ( Austropotamobius pallipes ) population during a crayfish plague outbreak followed by rescue. Knowledge and Management of Aquatic Ecosystems, 417, 1. https://doi.org/10.1051/kmae/2015037

Mon, K. K. Z., Saelao, P., Halstead, M. M., Chanthavixay, G., Chang, H.-C., Garas, L., Maga, E. A., & Zhou, H. (2015). Salmonella enterica Serovars Enteritidis Infection Alters the Indigenous Microbiota Diversity in Young Layer Chicks. Frontiers in Veterinary Science, 2. https://doi.org/10.3389/fvets.2015.00061

Falendysz, E. A., Lopera, J. G., Lorenzsonn, F., Salzer, J. S., Hutson, C. L., Doty, J., Gallardo-Romero, N., Carroll, D. S., Osorio, J. E., & Rocke, T. E. (2015). Further Assessment of Monkeypox Virus Infection in Gambian Pouched Rats (Cricetomys gambianus) Using In Vivo Bioluminescent Imaging. PLOS Neglected Tropical Diseases, 9(10), e0004130. https://doi.org/10.1371/journal.pntd.0004130

Barr-Beare, E., Saxena, V., Hilt, E. E., Thomas-White, K., Schober, M., Li, B., Becknell, B., Hains, D. S., Wolfe, A. J., & Schwaderer, A. L. (2015). The Interaction between Enterobacteriaceae and Calcium Oxalate Deposits. PLOS ONE, 10(10), e0139575. https://doi.org/10.1371/journal.pone.0139575

Agga, G. E., Arthur, T. M., Durso, L. M., Harhay, D. M., & Schmidt, J. W. (2015). Antimicrobial-Resistant Bacterial Populations and Antimicrobial Resistance Genes Obtained from Environments Impacted by Livestock and Municipal Waste. PLOS ONE, 10(7), e0132586. https://doi.org/10.1371/journal.pone.0132586

Nasrollahzadeh, D., Malekzadeh, R., Ploner, A., Shakeri, R., Sotoudeh, M., Fahimi, S., Nasseri-Moghaddam, S., Kamangar, F., Abnet, C. C., Winckler, B., Islami, F., Boffetta, P., Brennan, P., Dawsey, S. M., & Ye, W. (2015). Variations of gastric corpus microbiota are associated with early esophageal squamous cell carcinoma and squamous dysplasia. Scientific Reports, 5, 8820. https://doi.org/10.1038/srep08820

de la Torre, A., Metivier, A., Chu, F., Laurens, L. M. L., Beck, D. A. C., Pienkos, P. T., Lidstrom, M. E., & Kalyuzhnaya, M. G. (2015). Genome-scale metabolic reconstructions and theoretical investigation of methane conversion in Methylomicrobium buryatense strain 5G(B1). Microbial Cell Factories, 14(1). https://doi.org/10.1186/s12934-015-0377-3

Evers, M. M., Schut, M. H., Pepers, B. A., Atalar, M., van Belzen, M. J., Faull, R. L., Roos, R. A., & van Roon-Mom, W. M. (2015). Making (anti-) sense out of huntingtin levels in Huntington disease. Molecular Neurodegeneration, 10(1). https://doi.org/10.1186/s13024-015-0018-7

Ranjan, R., Rani, A., Metwally, A., McGee, H. S., & Perkins, D. L. (2015). Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing. Biochemical and Biophysical Research Communications. https://doi.org/10.1016/j.bbrc.2015.12.083

Chick, L. (2015). Linking physiology and biogeography: Disentangling the constraints on the distributions of ant species [University of Tennessee-Knoxville]. http://trace.tennessee.edu/cgi/viewcontent.cgi?article=4928&context=utk_graddiss

Becking, T., Mrugała, A., Delaunay, C., Svoboda, J., Raimond, M., Viljamaa-Dirks, S., Petrusek, A., Grandjean, F., & Braquart-Varnier, C. (2015). Effect of experimental exposure to differently virulent Aphanomyces astaci strains on the immune response of the noble crayfish Astacus astacus. Journal of Invertebrate Pathology, 132, 115–124. https://doi.org/10.1016/j.jip.2015.08.007

Tian, X., Liu, M., Su, X., Jiang, Z., Ma, Q., Liao, X., Li, X., Zhou, Z., Li, C., & Zhou, R. (2015). Mapping the epitope of neutralizing monoclonal antibodies against human adenovirus type 3. Virus Research, 208, 66–72. https://doi.org/10.1016/j.virusres.2015.06.002

Janocko, L., Althouse, A. D., Brand, R. M., Cranston, R. D., & McGowan, I. (2015). The Molecular Characterization of Intestinal Explant HIV Infection Using Polymerase Chain Reaction-Based Techniques. AIDS Research and Human Retroviruses, 31(10), 981–991. https://doi.org/10.1089/aid.2015.0165

Andersson, S., Sikora, P., Karlberg, M. L., Winiecka-Krusnell, J., Alm, E., Beser, J., & Arrighi, R. B. G. (2015). It’s a dirty job — A robust method for the purification and de novo genome assembly of Cryptosporidium from clinical material. Journal of Microbiological Methods, 113, 10–12. https://doi.org/10.1016/j.mimet.2015.03.018

Kraaijeveld, K., de Weger, L. A., Ventayol García, M., Buermans, H., Frank, J., Hiemstra, P. S., & den Dunnen, J. T. (2015). Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing. Molecular Ecology Resources, 15(1), 8–16. https://doi.org/10.1111/1755-0998.12288

Sanchez, S., & Sellers, H. (2015). Biological Specimen Collection and Processing for Molecular Analysis. In M. V. Cunha & J. Inácio (Eds.), Veterinary Infection Biology: Molecular Diagnostics and High-Throughput Strategies (Vol. 1247, pp. 61–75). Springer New York. http://link.springer.com/10.1007/978-1-4939-2004-4_5

Krull, A. C., Shearer, J. K., Gorden, P. J., Cooper, V. L., Phillips, G. J., & Plummer, P. J. (2014). Deep Sequencing Analysis Reveals Temporal Microbiota Changes Associated with Development of Bovine Digital Dermatitis. Infection and Immunity, 82(8), 3359–3373. https://doi.org/10.1128/IAI.02077-14

Lakritz, J. R., Poutahidis, T., Levkovich, T., Varian, B. J., Ibrahim, Y. M., Chatzigiagkos, A., Mirabal, S., Alm, E. J., & Erdman, S. E. (2014). Beneficial bacteria stimulate host immune cells to counteract dietary and genetic predisposition to mammary cancer in mice: Probiotic bacteria protect against mammary cancer. International Journal of Cancer, 135(3), 529–540. https://doi.org/10.1002/ijc.28702

Ramos, P., Karnezis, A. N., Craig, D. W., Sekulic, A., Russell, M. L., Hendricks, W. P. D., Corneveaux, J. J., Barrett, M. T., Shumansky, K., Yang, Y., Shah, S. P., Prentice, L. M., Marra, M. A., Kiefer, J., Zismann, V. L., McEachron, T. A., Salhia, B., Prat, J., D’Angelo, E., … Trent, J. M. (2014). Small cell carcinoma of the ovary, hypercalcemic type, displays frequent inactivating germline and somatic mutations in SMARCA4. Nature Genetics, 46(5), 427–429. https://doi.org/10.1038/ng.2928

Liang, W. S., Aldrich, J., Tembe, W., Kurdoglu, A., Cherni, I., Phillips, L., Reiman, R., Baker, A., Weiss, G. J., Carpten, J. D., & Craig, D. W. (2014). Long insert whole genome sequencing for copy number variant and translocation detection. Nucleic Acids Research, 42(2), e8–e8. https://doi.org/10.1093/nar/gkt865

Quach, K., Grover, S. A., Kenigsberg, S., & Librach, C. L. (2014). A combination of single nucleotide polymorphisms in the 3′untranslated region of HLA-G is associated with preeclampsia. Human Immunology, 75(12), 1163–1170. https://doi.org/10.1016/j.humimm.2014.10.009

Bartnikowski, M., Klein, T. J., Melchels, F. P. W., & Woodruff, M. A. (2014). Effects of scaffold architecture on mechanical characteristics and osteoblast response to static and perfusion bioreactor cultures: Scaffold Architecture Static Perfusion Bioreactor. Biotechnology and Bioengineering, 111(7), 1440–1451. https://doi.org/10.1002/bit.25200

Kurtzman, C. P., & Robnett, C. J. (2014). Three new anascosporic genera of the Saccharomycotina: Danielozyma gen. nov., Deakozyma gen. nov. and Middelhovenomyces gen. nov. Antonie van Leeuwenhoek, 105(5), 933–942. https://doi.org/10.1007/s10482-014-0149-9

Melero, M., García-Párraga, D., Corpa, J., Ortega, J., Rubio-Guerri, C., Crespo, J., Rivera-Arroyo, B., & Sánchez-Vizcaíno, J. (2014). First molecular detection and characterization of herpesvirus and poxvirus in a Pacific walrus (Odobenus rosmarus divergens). BMC Veterinary Research, 10(1), 968. https://doi.org/10.1186/s12917-014-0308-2

Volk, H., Piskernik, S., Kurinčič, M., Klančnik, A., Toplak, N., & Jeršek, B. (2014). Evaluation of different methods for DNA extraction from milk. Jounal of Food and Nutrition Research, 53(2), 97–104.

Shanmugam, V., Ramanathan, R. K., Lavender, N. A., Sinari, S., Chadha, M., Liang, W. S., Kurdoglu, A., Izatt, T., Christoforides, A., Benson, H., Phillips, L., Baker, A., Murray, C., Hostetter, G., Von Hoff, D. D., Craig, D. W., & Carpten, J. D. (2014). Whole genome sequencing reveals potential targets for therapy in patients with refractory KRAS mutated metastatic colorectal cancer. BMC Medical Genomics, 7(1), 36. https://doi.org/10.1186/1755-8794-7-36

Silver, A. C., Dunne, D. W., Zeiss, C. J., Bockenstedt, L. K., Radolf, J. D., Salazar, J. C., & Fikrig, E. (2013). MyD88 Deficiency Markedly Worsens Tissue Inflammation and Bacterial Clearance in Mice Infected with Treponema pallidum, the Agent of Syphilis. PLoS ONE, 8(8), e71388. https://doi.org/10.1371/journal.pone.0071388

Filipová, L., Petrusek, A., Matasová, K., Delaunay, C., & Grandjean, F. (2013). Prevalence of the Crayfish Plague Pathogen Aphanomyces astaci in Populations of the Signal Crayfish Pacifastacus leniusculus in France: Evaluating the Threat to Native Crayfish. PLoS ONE, 8(7), e70157. https://doi.org/10.1371/journal.pone.0070157

Tong, K., Zhang, Y., Liu, G., Ye, Z., & Chu, P. K. (2013). Treatment of heavy oil wastewater by a conventional activated sludge process coupled with an immobilized biological filter. International Biodeterioration & Biodegradation, 84, 65–71. https://doi.org/10.1016/j.ibiod.2013.06.002

Kurtzman, C. P., & Robnett, C. J. (2013). Alloascoidea hylecoeti gen. nov., comb. nov., Alloascoidea africana comb. nov., Ascoidea tarda sp. nov., and Nadsonia starkeyi-henricii comb. nov., new members of the Saccharomycotina ( Ascomycota ). FEMS Yeast Research, 13(5), 423–432. https://doi.org/10.1111/1567-1364.12044

Liu, G., Ye, Z., Tong, K., & Zhang, Y. (2013). Biotreatment of heavy oil wastewater by combined upflow anaerobic sludge blanket and immobilized biological aerated filter in a pilot-scale test. Biochemical Engineering Journal, 72, 48–53. https://doi.org/10.1016/j.bej.2012.12.017

Rubio-Guerri, C., Melero, M., Esperón, F., Bellière, E., Arbelo, M., Crespo, J., Sierra, E., García-Párraga, D., & Sánchez-Vizcaíno, J. (2013). Unusual striped dolphin mass mortality episode related to cetacean morbillivirus in the Spanish Mediterranean sea. BMC Veterinary Research, 9(1), 106. https://doi.org/10.1186/1746-6148-9-106

Hawkins, M. G., Winder, D. M., Ball, S. L. R., Vaughan, K., Sonnex, C., Stanley, M. A., Sterling, J. C., & Goon, P. K. C. (2013). Detection of specific HPV subtypes responsible for the pathogenesis of condylomata acuminata. Virology Journal, 10(1), 137. https://doi.org/10.1186/1743-422X-10-137

Araújo-Pérez, F., McCoy, A. N., Okechukwu, C., Carroll, I. M., Smith, K. M., Jeremiah, K., Sandler, R. S., Asher, G. N., & Keku, T. O. (2012). Differences in microbial signatures between rectal mucosal biopsies and rectal swabs. Gut Microbes, 3(6), 530–535. https://doi.org/10.4161/gmic.22157

Liang, W. S., Craig, D. W., Carpten, J., Borad, M. J., Demeure, M. J., Weiss, G. J., Izatt, T., Sinari, S., Christoforides, A., Aldrich, J., Kurdoglu, A., Barrett, M., Phillips, L., Benson, H., Tembe, W., Braggio, E., Kiefer, J. A., Legendre, C., Posner, R., … Von Hoff, D. (2012). Genome-Wide Characterization of Pancreatic Adenocarcinoma Patients Using Next Generation Sequencing. PLoS ONE, 7(10), e43192. https://doi.org/10.1371/journal.pone.0043192

Weiss, G. J., Liang, W. S., Izatt, T., Arora, S., Cherni, I., Raju, R. N., Hostetter, G., Kurdoglu, A., Christoforides, A., Sinari, S., Baker, A. S., Metpally, R., Tembe, W. D., Phillips, L., Von Hoff, D. D., Craig, D. W., & Carpten, J. D. (2012). Paired Tumor and Normal Whole Genome Sequencing of Metastatic Olfactory Neuroblastoma. PLoS ONE, 7(5), e37029. https://doi.org/10.1371/journal.pone.0037029

Wang, Y., Zhang, Y., Yang, J., Ni, X., Liu, S., Li, Z., E. Hodges, S., E. Fisher, W., C. Brunicardi, F., A. Gibbs, R., Gingras, M.-C., & Li, M. (2012). Genomic Sequencing of Key Genes in Mouse Pancreatic Cancer Cells. Current Molecular Medicine, 12(3), 331–341. https://doi.org/10.2174/156652412799218868

Smith, K. M., Anthony, S. J., Switzer, W. M., Epstein, J. H., Seimon, T., Jia, H., Sanchez, M. D., Huynh, T. T., Galland, G. G., Shapiro, S. E., Sleeman, J. M., McAloose, D., Stuchin, M., Amato, G., Kolokotronis, S.-O., Lipkin, W. I., Karesh, W. B., Daszak, P., & Marano, N. (2012). Zoonotic Viruses Associated with Illegally Imported Wildlife Products. PLoS ONE, 7(1), e29505. https://doi.org/10.1371/journal.pone.0029505

Yin, Y., Liu, Y., Jin, H., Wang, S., Zhao, S., Geng, X., Li, M., & Xu, F. (2012). Polyethylene glycol-mediated transformation of fused egfp-hph gene under the control of gpd promoter in Pleurotus eryngii. Biotechnology Letters, 34(10), 1895–1900. https://doi.org/10.1007/s10529-012-0985-5

Bourgeois, A. L., Rinderer, T. E., Sylvester, H. A., Holloway, B., & Oldroyd, B. P. (2012). Patterns of Apis mellifera infestation by Nosema ceranae support the parasite hypothesis for the evolution of extreme polyandry in eusocial insects. Apidologie, 43(5), 539–548. https://doi.org/10.1007/s13592-012-0121-5

Suzuki, Y., Murray, S. L., Wong, K. H., Davis, M. A., & Hynes, M. J. (2012). Reprogramming of carbon metabolism by the transcriptional activators AcuK and AcuM in Aspergillus nidulans: Transcription factors controlling carbon metabolism. Molecular Microbiology, 84(5), 942–964. https://doi.org/10.1111/j.1365-2958.2012.08067.x

Kang, H. J., Kawasawa, Y. I., Cheng, F., Zhu, Y., Xu, X., Li, M., Sousa, A. M. M., Pletikos, M., Meyer, K. A., Sedmak, G., Guennel, T., Shin, Y., Johnson, M. B., Krsnik, Ž., Mayer, S., Fertuzinhos, S., Umlauf, S., Lisgo, S. N., Vortmeyer, A., … Šestan, N. (2011). Spatio-temporal transcriptome of the human brain. Nature, 478(7370), 483–489. https://doi.org/10.1038/nature10523

Augustine, R. C., Pattavina, K. A., Tuzel, E., Vidali, L., & Bezanilla, M. (2011). Actin Interacting Protein1 and Actin Depolymerizing Factor Drive Rapid Actin Dynamics in Physcomitrella patens. The Plant Cell, 23(10), 3696–3710. https://doi.org/10.1105/tpc.111.090753

Buck, J. C., Truong, L., & Blaustein, A. R. (2011). Predation by zooplankton on Batrachochytrium dendrobatidis: biological control of the deadly amphibian chytrid fungus? Biodiversity and Conservation, 20(14), 3549–3553. https://doi.org/10.1007/s10531-011-0147-4

Sivam, S., Sciurba, F. C., Lucht, L. A., Zhang, Y., Duncan, S. R., Norris, K. A., & Morris, A. (2011). Distribution of Pneumocystis jirovecii in lungs from colonized COPD patients. Diagnostic Microbiology and Infectious Disease, 71(1), 24–28. https://doi.org/10.1016/j.diagmicrobio.2011.05.008

Repnik, K., & Potočnik, U. (2011). Haplotype in the IBD5 region is associated with refractory Crohn’s disease in Slovenian patients and modulates expression of the SLC22A5 gene. Journal of Gastroenterology, 46(9), 1081–1091. https://doi.org/10.1007/s00535-011-0426-6

Romero-Afrima, L., Zelmanovich, V., Abergel, Z., Zuckerman, B., Shaked, M., Abergel, R., Livshits, L., Smith, Y., & Gross, E. (2020). Ferritin is regulated by a neuro-intestinal axis in the nematode Caenorhabditis elegans. Redox Biology, 28, 101359. https://doi.org/10.1016/j.redox.2019.101359

Perland, E., Lekholm, E., Eriksson, M. M., Bagchi, S., Arapi, V., & Fredriksson, R. (2016). The Putative SLC Transporters Mfsd5 and Mfsd11 Are Abundantly Expressed in the Mouse Brain and Have a Potential Role in Energy Homeostasis. PLOS ONE, 11(6), e0156912. https://doi.org/10.1371/journal.pone.0156912

Metzger, D. C. H., Hemmer-Hansen, J., & Schulte, P. M. (2016). Conserved structure and expression of hsp70 paralogs in teleost fishes. Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, 18, 10–20. https://doi.org/10.1016/j.cbd.2016.01.007

Lui, H., Zhang, J., Makinson, S. R., Cahill, M. K., Kelley, K. W., Huang, H.-Y., Shang, Y., Oldham, M. C., Martens, L. H., Gao, F., Coppola, G., Sloan, S. A., Hsieh, C. L., Kim, C. C., Bigio, E. H., Weintraub, S., Mesulam, M.-M., Rademakers, R., Mackenzie, I. R., … Huang, E. J. (2016). Progranulin Deficiency Promotes Circuit-Specific Synaptic Pruning by Microglia via Complement Activation. Cell, 165(4), 921–935. https://doi.org/10.1016/j.cell.2016.04.001

Mashock, M. J. (2016). Examining mechanism of toxicity of copper oxide nanoparticles to Saccharomyces cerevisiae and Caenorhabditis elegans. Marquette University.

Kim, S.-H., Kim, S., Shin, Y., Lee, H.-S., Jeon, M., Kim, S.-O., Cho, S.-W., Ruparel, N. B., & Song, J. S. (2016). Comparative Gene Expression Analysis of the Coronal Pulp and Apical Pulp Complex in Human Immature Teeth. Journal of Endodontics, 42(5), 752–759. https://doi.org/10.1016/j.joen.2016.01.024

Lei, S., Ryu, J., Wen, K., Twitchell, E., Bui, T., Ramesh, A., Weiss, M., Li, G., Samuel, H., Clark-Deener, S., Jiang, X., Lee, K., & Yuan, L. (2016). Increased and prolonged human norovirus infection in RAG2/IL2RG deficient gnotobiotic pigs with severe combined immunodeficiency. Scientific Reports, 6. https://doi.org/10.1038/srep25222

Lei, S., Samuel, H., Twitchell, E., Bui, T., Ramesh, A., Wen, K., Weiss, M., Li, G., Yang, X., Jiang, X., & Yuan, L. (2016). Enterobacter cloacae inhibits human norovirus infectivity in gnotobiotic pigs. Scientific Reports, 6. https://doi.org/10.1038/srep25017

Jansson, E., Mattsson, A., Goldstone, J., & Berg, C. (2016). Sex-dependent expression of anti-Müllerian hormone (amh) and amh receptor 2 during sex organ differentiation and characterization of the Müllerian duct development in Xenopus tropicalis. General and Comparative Endocrinology, 229, 132–144. https://doi.org/10.1016/j.ygcen.2016.03.018

Kang, C.-M., Kim, H., Song, J. S., Choi, B.-J., Kim, S.-O., Jung, H.-S., Moon, S.-J., Choi, H.-J., Kang, C.-M., Kim, H., Song, J. S., Choi, B.-J., Kim, S.-O., Jung, H.-S., Moon, S.-J., & Choi, H.-J. (2016). Genetic Comparison of Stemness of Human Umbilical Cord and Dental Pulp, Genetic Comparison of Stemness of Human Umbilical Cord and Dental Pulp. Stem Cells International, Stem Cells International, 2016, 2016, e3453890. https://doi.org/10.1155/2016/3453890, 10.1155/2016/3453890

Menon, R., Behnia, F., Polettini, J., Saade, G. R., Campisi, J., & Velarde, M. (2016). Placental membrane aging and HMGB1 signaling associated with human parturition. Aging (Albany NY), 8(2), 216–229. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4789578/

Bakmiwewa, S. M., Weiser, S., Grey, M., Heng, B., Guillemin, G. J., Ball, H. J., & Hunt, N. H. (2016). Synergistic induction of CXCL10 by interferon-gamma and lymphotoxin-alpha in astrocytes: Possible role in cerebral malaria. Cytokine, 78, 79–86. https://doi.org/10.1016/j.cyto.2015.11.024

Perkin, L., Elpidina, E. N., & Oppert, B. (2016). Expression patterns of cysteine peptidase genes across the Tribolium castaneum life cycle provide clues to biological function. PeerJ, 4, e1581. https://doi.org/10.7717/peerj.1581

Hallgren, S., & Viberg, H. (2016). Postnatal exposure to PFOS, but not PBDE 99, disturb dopaminergic gene transcription in the mouse CNS. Environmental Toxicology and Pharmacology, 41, 121–126. https://doi.org/10.1016/j.etap.2015.11.016

Tranchemontagne, Z. R., Camire, R. B., O’Donnell, V. J., Baugh, J., & Burkholder, K. M. (2016). Staphylococcus aureus Strain USA300 Perturbs Acquisition of Lysosomal Enzymes and Requires Phagosomal Acidification for Survival inside Macrophages. Infection and Immunity, 84(1), 241–253. https://doi.org/10.1128/IAI.00704-15

Goodchild, C. G., Frederich, M., & Zeeman, S. I. (2016). Is altered behavior linked to cellular energy regulation in a freshwater mussel (Elliptio complanata) exposed to triclosan? Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology, 179, 150–157. https://doi.org/10.1016/j.cbpc.2015.10.008

Stanton-Geddes, J., Nguyen, A., Chick, L., Vincent, J., Vangala, M., Dunn, R. R., Ellison, A. M., Sanders, N. J., Gotelli, N. J., & Cahan, S. H. (2016). Thermal reactionomes reveal divergent responses to thermal extremes in warm and cool-climate ant species. BMC Genomics, 17, 171. https://doi.org/10.1186/s12864-016-2466-z

Nguyen, A. D., Gotelli, N. J., & Cahan, S. H. (2016). The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera. BMC Evolutionary Biology, 16, 15. https://doi.org/10.1186/s12862-015-0573-0

Masterson, L., Winder, D. M., Ball, S. L. R., Vaughan, K., Lehmann, M., Scholtz, L.-U., Sterling, J. C., Sudhoff, H. H., & Goon, P. K. C. (2016). Molecular analyses of unselected head and neck cancer cases demonstrates that human papillomavirus transcriptional activity is positively associated with survival and prognosis. BMC Cancer, 16, 367. https://doi.org/10.1186/s12885-016-2398-7

Wilde, A. D., Snyder, D. J., Putnam, N. E., Valentino, M. D., Hammer, N. D., Lonergan, Z. R., Hinger, S. A., Aysanoa, E. E., Blanchard, C., Dunman, P. M., Wasserman, G. A., Chen, J., Shopsin, B., Gilmore, M. S., Skaar, E. P., & Cassat, J. E. (2015). Bacterial Hypoxic Responses Revealed as Critical Determinants of the Host-Pathogen Outcome by TnSeq Analysis of Staphylococcus aureus Invasive Infection. PLOS Pathogens, 11(12), e1005341. https://doi.org/10.1371/journal.ppat.1005341

Marvin, S. A., Huerta, C. T., Sharp, B., Freiden, P., Cline, T. D., & Schultz-Cherry, S. (2015). Type I Interferon Response Limits Astrovirus Replication and Protects Against Increased Barrier Permeability in vitro and in vivo. Journal of Virology, JVI.02367-15. https://doi.org/10.1128/JVI.02367-15

Wang, Y., Billon, C., Walker, J. K., & Burris, T. P. (2015). Therapeutic Effect of a Synthetic RORα/γ Agonist in an Animal Model of Autism. ACS Chemical Neuroscience. https://doi.org/10.1021/acschemneuro.5b00159

Lee, D., Ahn, C., An, B.-S., & Jeung, E.-B. (2015). Induction of the Estrogenic Marker Calbindn-D9k by Octamethylcyclotetrasiloxane. International Journal of Environmental Research and Public Health, 12(11), 14610–14625. https://doi.org/10.3390/ijerph121114610

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