Bullet Blender Publications: Large Animal Tissue

Publications that involve processing tissue from large animals, including humans.

Cat

Borschensky, C. M., & Reinacher, M. (2014). Mutations in the 3c and 7b genes of feline coronavirus in spontaneously affected FIP cats. Research in Veterinary Science, 97(2), 333–340. https://doi.org/10.1016/j.rvsc.2014.07.016

Cattle

Ohana, D., Dalebout, H., Marissen, R. J., Wulff, T., Bergquist, J., Deelder, A. M., & Palmblad, M. (2016). Identification of meat products by shotgun spectral matching. Food Chemistry, 203, 28–34. https://doi.org/10.1016/j.foodchem.2016.01.138
Everman, J. L., Eckstein, T. M., Roussey, J., Coussens, P., Bannantine, J. P., & Bermudez, L. E. (2015). Characterization of the inflammatory phenotype of Mycobacterium avium subspecies paratuberculosis using a novel cell culture passage model. Microbiology, 161(7), 1420–1434. https://doi.org/10.1099/mic.0.000106
Palomares, R. A., Sakamoto, K., Walz, H. L., Brock, K. V., & Hurley, D. J. (2015). Acute infection with bovine viral diarrhea virus of low or high virulence leads to depletion and redistribution of WC1+ γδ T cells in lymphoid tissues of beef calves. Veterinary Immunology and Immunopathology, 167(3–4), 190–195. https://doi.org/10.1016/j.vetimm.2015.07.016
Krull, A. C., Shearer, J. K., Gorden, P. J., Cooper, V. L., Phillips, G. J., & Plummer, P. J. (2014). Deep Sequencing Analysis Reveals Temporal Microbiota Changes Associated with Development of Bovine Digital Dermatitis. Infection and Immunity, 82(8), 3359–3373. https://doi.org/10.1128/IAI.02077-14
Palomares, R. A., Hurley, D. J., Woolums, A. R., Parrish, J. E., & Brock, K. V. (2014). Analysis of mRNA expression for genes associated with regulatory T lymphocytes (CD25, FoxP3, CTLA4, and IDO) after experimental infection with bovine viral diarrhea virus of low or high virulence in beef calves. Comparative Immunology, Microbiology and Infectious Diseases, 37(5–6), 331–338. https://doi.org/10.1016/j.cimid.2014.10.001
Palomares, R. A., Parrish, J., Woolums, A. R., Brock, K. V., & Hurley, D. J. (2014). Expression of toll-like receptors and co-stimulatory molecules in lymphoid tissue during experimental infection of beef calves with bovine viral diarrhea virus of low and high virulence. Veterinary Research Communications, 38(4), 329–335. https://doi.org/10.1007/s11259-014-9613-2
Goosen, W. J., Miller, M. A., Chegou, N. N., Cooper, D., Warren, R. M., van Helden, P. D., & Parsons, S. D. C. (2014). Agreement between assays of cell-mediated immunity utilizing Mycobacterium bovis-specific antigens for the diagnosis of tuberculosis in African buffaloes (Syncerus caffer). Veterinary Immunology and Immunopathology, 160(1–2), 133–138. https://doi.org/10.1016/j.vetimm.2014.03.015
Palomares, R. A., Brock, K. V., & Walz, P. H. (2014). Differential expression of pro-inflammatory and anti-inflammatory cytokines during experimental infection with low or high virulence bovine viral diarrhea virus in beef calves. Veterinary Immunology and Immunopathology, 157(3–4), 149–154. https://doi.org/10.1016/j.vetimm.2013.12.002
Volk, H., Piskernik, S., Kurinčič, M., Klančnik, A., Toplak, N., & Jeršek, B. (2014). Evaluation of different methods for DNA extraction from milk. Jounal of Food and Nutrition Research, 53(2), 97–104.
Palomares, R. A., Walz, H. G., & Brock, K. V. (2013). Expression of type I interferon-induced antiviral state and pro-apoptosis markers during experimental infection with low or high virulence bovine viral diarrhea virus in beef calves. Virus Research, 173(2), 260–269. https://doi.org/10.1016/j.virusres.2013.02.010
Hong, N., De-Xing, Q., Deng-Xiang, Z., & Long-Zhong, R. (2012). A Simple Cultural Method for Detection of Mycoplasma bovis. Journal of Animal and Veterinary Advances, 11(10), 1643–1646. https://doi.org/10.3923/javaa.2012.1643.1646

Deer

Hoover, C. E., Davenport, K. A., Henderson, D. M., Pulscher, L. A., Mathiason, C. K., Zabel, M. D., & Hoover, E. A. (2016). Detection and Quantification of CWD Prions in Fixed Paraffin Embedded Tissues by Real-Time Quaking-Induced Conversion. Scientific Reports, 6. https://doi.org/10.1038/srep25098
Elder, A. M., Henderson, D. M., Nalls, A. V., Wilham, J. M., Caughey, B. W., Hoover, E. A., Kincaid, A. E., Bartz, J. C., & Mathiason, C. K. (2013). In Vitro Detection of prionemia in TSE-Infected Cervids and Hamsters. PLoS ONE, 8(11), e80203. https://doi.org/10.1371/journal.pone.0080203
Nichols, T. A., Spraker, T. R., Rigg, T. D., Meyerett-Reid, C., Hoover, C., Michel, B., Bian, J., Hoover, E., Gidlewski, T., Balachandran, A., O’Rourke, K., Telling, G. C., Bowen, R., Zabel, M. D., & VerCauteren, K. C. (2013). Intranasal Inoculation of White-Tailed Deer (Odocoileus virginianus) with Lyophilized Chronic Wasting Disease Prion Particulate Complexed to Montmorillonite Clay. PLoS ONE, 8(5), e62455. https://doi.org/10.1371/journal.pone.0062455

Dog

Khademi, S., Frye, M. A., Jeckel, K. M., Schroeder, T., Monnet, E., Irwin, D. C., Cole, P. A., Bell, C., Miller, B. F., & Hamilton, K. L. (2015). Hypoxia mediated pulmonary edema: potential influence of oxidative stress, sympathetic activation and cerebral blood flow. BMC Physiology, 15(1). https://doi.org/10.1186/s12899-015-0018-4

Dolphin

Rubio-Guerri, C., Melero, M., Esperón, F., Bellière, E., Arbelo, M., Crespo, J., Sierra, E., García-Párraga, D., & Sánchez-Vizcaíno, J. (2013). Unusual striped dolphin mass mortality episode related to cetacean morbillivirus in the Spanish Mediterranean sea. BMC Veterinary Research, 9(1), 106. https://doi.org/10.1186/1746-6148-9-106

Human

Lim, M. Y., Hong, S., Kim, B.-M., Ahn, Y., Kim, H.-J., & Nam, Y.-D. (2020). Changes in microbiome and metabolomic profiles of fecal samples stored with stabilizing solution at room temperature: a pilot study. Scientific Reports, 10(1), 1789. https://doi.org/10.1038/s41598-020-58719-8
Mahinrad, S., Bulk, M., van der Velpen, I., Mahfouz, A., van Roon-Mom, W., Fedarko, N., Yasar, S., Sabayan, B., van Heemst, D., & van der Weerd, L. (2018). Natriuretic Peptides in Post-mortem Brain Tissue and Cerebrospinal Fluid of Non-demented Humans and Alzheimer’s Disease Patients. Frontiers in Neuroscience, 12, 864. https://doi.org/10.3389/fnins.2018.00864
Murray, H. C., Low, V. F., Swanson, M. E. V., Dieriks, B. V., Turner, C., Faull, R. L. M., & Curtis, M. A. (2016). Distribution of PSA-NCAM in normal, Alzheimer’s and Parkinson’s disease human brain. Neuroscience, 330, 359–375. https://doi.org/10.1016/j.neuroscience.2016.06.003
Rubinchik-Stern, M., Shmuel, M., Bar, J., Eyal, S., & Kovo, M. (2016). Maternal–fetal transfer of indocyanine green across the perfused human placenta. Reproductive Toxicology, 62, 100–105. https://doi.org/10.1016/j.reprotox.2016.04.017
Kim, S.-H., Kim, S., Shin, Y., Lee, H.-S., Jeon, M., Kim, S.-O., Cho, S.-W., Ruparel, N. B., & Song, J. S. (2016). Comparative Gene Expression Analysis of the Coronal Pulp and Apical Pulp Complex in Human Immature Teeth. Journal of Endodontics, 42(5), 752–759. https://doi.org/10.1016/j.joen.2016.01.024
Kang, C.-M., Kim, H., Song, J. S., Choi, B.-J., Kim, S.-O., Jung, H.-S., Moon, S.-J., Choi, H.-J., Kang, C.-M., Kim, H., Song, J. S., Choi, B.-J., Kim, S.-O., Jung, H.-S., Moon, S.-J., & Choi, H.-J. (2016). Genetic Comparison of Stemness of Human Umbilical Cord and Dental Pulp, Genetic Comparison of Stemness of Human Umbilical Cord and Dental Pulp. Stem Cells International, Stem Cells International, 2016, 2016, e3453890. https://doi.org/10.1155/2016/3453890, 10.1155/2016/3453890
Bennike, T. B., Kastaniegaard, K., Padurariu, S., Gaihede, M., Birkelund, S., Andersen, V., & Stensballe, A. (2016). Proteome stability analysis of snap frozen, RNAlater preserved, and formalin-fixed paraffin-embedded human colon mucosal biopsies. Data in Brief, 6, 942–947. https://doi.org/10.1016/j.dib.2016.01.061
Menon, R., Behnia, F., Polettini, J., Saade, G. R., Campisi, J., & Velarde, M. (2016). Placental membrane aging and HMGB1 signaling associated with human parturition. Aging (Albany NY), 8(2), 216–229. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4789578/
Bennike, T. B., Kastaniegaard, K., Padurariu, S., Gaihede, M., Birkelund, S., Andersen, V., & Stensballe, A. (2016). Comparing the proteome of snap frozen, RNAlater preserved, and formalin-fixed paraffin-embedded human tissue samples. EuPA Open Proteomics, 10, 9–18. https://doi.org/10.1016/j.euprot.2015.10.001
Lee, M., Kim, D. W., Yoon, H., So, D., Khalmuratova, R., Rhee, C.-S., Park, J.-W., & Shin, H.-W. (2016). Sirtuin 1 attenuates nasal polypogenesis by suppressing epithelial-to-mesenchymal transition. Journal of Allergy and Clinical Immunology, 137(1), 87-98.e7. https://doi.org/10.1016/j.jaci.2015.07.026
Park, W. C., Kim, H.-R., Kang, D. B., Ryu, J.-S., Choi, K.-H., Lee, G.-O., Yun, K. J., Kim, K. Y., Park, R., Yoon, K.-H., Cho, J.-H., Lee, Y.-J., Chae, S.-C., Park, M.-C., & Park, D.-S. (2016). Comparative expression patterns and diagnostic efficacies of SR splicing factors and HNRNPA1 in gastric and colorectal cancer. BMC Cancer, 16, 358. https://doi.org/10.1186/s12885-016-2387-x
Masterson, L., Winder, D. M., Ball, S. L. R., Vaughan, K., Lehmann, M., Scholtz, L.-U., Sterling, J. C., Sudhoff, H. H., & Goon, P. K. C. (2016). Molecular analyses of unselected head and neck cancer cases demonstrates that human papillomavirus transcriptional activity is positively associated with survival and prognosis. BMC Cancer, 16, 367. https://doi.org/10.1186/s12885-016-2398-7
Gallart-Palau, X., Serra, A., & Sze, S. K. (2016). Enrichment of extracellular vesicles from tissues of the central nervous system by PROSPR. Molecular Neurodegeneration, 11, 41. https://doi.org/10.1186/s13024-016-0108-1
Gallart-Palau, X., Lee, B. S. T., Adav, S. S., Qian, J., Serra, A., Park, J. E., Lai, M. K. P., Chen, C. P., Kalaria, R. N., & Sze, S. K. (2016). Gender differences in white matter pathology and mitochondrial dysfunction in Alzheimer’s disease with cerebrovascular disease. Molecular Brain, 9, 27. https://doi.org/10.1186/s13041-016-0205-7
Marin, S. J., & McMillin, G. A. (2016). Quantitation of Total Buprenorphine  and Norbuprenorphine in Meconium by LC-MS/MS. In Clinical Applications of Mass Spectrometry in Drug Analysis: Methods and Protocols (Vol. 1383, pp. 59–68). Springer Science+Business Media.
Tristán-Noguero, A., Díez, H., Jou, C., Pineda, M., Ormazábal, A., Sánchez, A., Artuch, R., & Garcia-Cazorla, À. (2015). Study of a fetal brain affected by a severe form of tyrosine hydroxylase deficiency, a rare cause of early parkinsonism. Metabolic Brain Disease. https://doi.org/10.1007/s11011-015-9780-z
Rand, M. D., Vorojeikina, D., van Wijngaarden, E., Jackson, B. P., Scrimale, T., Zareba, G., Love, T. M., Myers, G. J., & Watson, G. E. (2015). Methods for Individualized Determination of Methylmercury Elimination Rate and De-Methylation Status in Humans Following Fish Consumption. Toxicological Sciences, kfv241. https://doi.org/10.1093/toxsci/kfv241
Shokati, T., Bodenberger, N., Gadpaille, H., Schniedewind, B., Vinks, A. A., Jiang, W., Alloway, R. R., & Christians, U. (2015). Quantification of the Immunosuppressant Tacrolimus on Dried Blood Spots Using LC-MS/MS. Journal of Visualized Experiments, 105. https://doi.org/10.3791/52424
Ruhaak, L. R., Taylor, S. L., Stroble, C., Nguyen, U. T., Parker, E. A., Song, T., Lebrilla, C. B., Rom, W. N., Pass, H., Kim, K., Kelly, K., & Miyamoto, S. (2015). Differential N-Glycosylation Patterns in Lung Adenocarcinoma Tissue. Journal of Proteome Research, 14(11), 4538–4549. https://doi.org/10.1021/acs.jproteome.5b00255
Larsen, F. J., Schiffer, T. A., Ortenblad, N., Zinner, C., Morales-Alamo, D., Willis, S. J., Calbet, J. A., Holmberg, H.-C., & Boushel, R. (2015). High-intensity sprint training inhibits mitochondrial respiration through aconitase inactivation. The FASEB Journal. https://doi.org/10.1096/fj.15-276857
Neve, E. P. A., Köfeler, H., Hendriks, D. F. G., Nordling, Å., Gogvadze, V., Mkrtchian, S., Näslund, E., & Ingelman-Sundberg, M. (2015). Expression and Function of mARC: Roles in Lipogenesis and Metabolic Activation of Ximelagatran. PLOS ONE, 10(9), e0138487. https://doi.org/10.1371/journal.pone.0138487
Booth, J. S., Salerno-Goncalves, R., Blanchard, T. G., Patil, S. A., Kader, H. A., Safta, A. M., Morningstar, L. M., Czinn, S. J., Greenwald, B. D., & Sztein, M. B. (2015). Mucosal-Associated Invariant T Cells in the Human Gastric Mucosa and Blood: Role in Helicobacter pylori Infection. Frontiers in Immunology, 6. https://doi.org/10.3389/fimmu.2015.00466
Nam, S. H., Kim, D., Lee, M.-S., Lee, D., Kwak, T. K., Kang, M., Ryu, J., Kim, H.-J., Song, H. E., Choi, J., Lee, G.-H., Kim, S.-Y., Park, S. H., Kim, D. G., Kwon, N. H., Kim, T. Y., Thiery, J. P., Kim, S., & Lee, J. W. (2015). Noncanonical roles of membranous lysyl-tRNA synthetase in transducing cell-substrate signaling for invasive dissemination of colon cancer spheroids in 3D collagen I gels. Oncotarget, 6(25), 21655–21674. https://doi.org/10.18632/oncotarget.4130
Dragunow, M., Feng, S., Rustenhoven, J., Curtis, M., & Faull, R. (2015). Studying Human Brain Inflammation in Leptomeningeal and Choroid Plexus Explant Cultures. Neurochemical Research. https://doi.org/10.1007/s11064-015-1682-2
Keung, E. Z., Akdemir, K. C., Al Sannaa, G. A., Garnett, J., Lev, D., Torres, K. E., Lazar, A. J., Rai, K., & Chin, L. (2015). Increased H3K9me3 drives dedifferentiated phenotype via KLF6 repression in liposarcoma. Journal of Clinical Investigation, 125(8), 2965–2978. https://doi.org/10.1172/JCI77976
Dordevic, A., Pendergast, F., Morgan, H., Villas-Boas, S., Caldow, M., Larsen, A., Sinclair, A., & Cameron-Smith, D. (2015). Postprandial Responses to Lipid and Carbohydrate Ingestion in Repeated Subcutaneous Adipose Tissue Biopsies in Healthy Adults. Nutrients, 7(7), 5347–5361. https://doi.org/10.3390/nu7075224
Kwon, J. J., Nabinger, S. C., Vega, Z., Sahu, S. S., Alluri, R. K., Abdul-Sater, Z., Yu, Z., Gore, J., Nalepa, G., Saxena, R., Korc, M., & Kota, J. (2015). Pathophysiological role of microRNA-29 in pancreatic cancer stroma. Scientific Reports, 5, 11450. https://doi.org/10.1038/srep11450
Danan-Gotthold, M., Golan-Gerstl, R., Eisenberg, E., Meir, K., Karni, R., & Levanon, E. Y. (2015). Identification of recurrent regulated alternative splicing events across human solid tumors. Nucleic Acids Research, 43(10), 5130–5144. https://doi.org/10.1093/nar/gkv210
Grasso, C. S., Tang, Y., Truffaux, N., Berlow, N. E., Liu, L., Debily, M.-A., Quist, M. J., Davis, L. E., Huang, E. C., Woo, P. J., Ponnuswami, A., Chen, S., Johung, T. B., Sun, W., Kogiso, M., Du, Y., Qi, L., Huang, Y., Hütt-Cabezas, M., … Monje, M. (2015). Functionally defined therapeutic targets in diffuse intrinsic pontine glioma. Nature Medicine, 21(6), 555–559. https://doi.org/10.1038/nm.3855
Choong, E., Guo, J., Persson, A., Virding, S., Johansson, I., Mkrtchian, S., & Ingelman-Sundberg, M. (2015). Developmental Regulation and Induction of Cytochrome P450 2W1, an Enzyme Expressed in Colon Tumors. PLOS ONE, 10(4), e0122820. https://doi.org/10.1371/journal.pone.0122820
Nasrollahzadeh, D., Malekzadeh, R., Ploner, A., Shakeri, R., Sotoudeh, M., Fahimi, S., Nasseri-Moghaddam, S., Kamangar, F., Abnet, C. C., Winckler, B., Islami, F., Boffetta, P., Brennan, P., Dawsey, S. M., & Ye, W. (2015). Variations of gastric corpus microbiota are associated with early esophageal squamous cell carcinoma and squamous dysplasia. Scientific Reports, 5, 8820. https://doi.org/10.1038/srep08820
Sahu, R. (2015). Expression of the platelet-activating factor receptor enhances benzyl isothiocyanate-induced apoptosis in murine and human melanoma cells. Molecular Medicine Reports. https://doi.org/10.3892/mmr.2015.3371
Wang, H., Yang, Y., Li, Y., Bai, B., Wang, X., Tan, H., Liu, T., Beach, T. G., Peng, J., & Wu, Z. (2015). Systematic Optimization of Long Gradient Chromatography Mass Spectrometry for Deep Analysis of Brain Proteome. Journal of Proteome Research, 14(2), 829–838. https://doi.org/10.1021/pr500882h
Seshadri, S., Lu, X., Purkey, M. R., Homma, T., Choi, A. W., Carter, R., Suh, L., Norton, J., Harris, K. E., Conley, D. B., Kato, A., Avila, P. C., Czarnocka, B., Kopp, P. A., Peters, A. T., Grammer, L. C., Chandra, R. K., Tan, B. K., Liu, Z., … Schleimer, R. P. (2015). Increased expression of the epithelial anion transporter pendrin/SLC26A4 in nasal polyps of patients with chronic rhinosinusitis. Journal of Allergy and Clinical Immunology, 136(6), 1548-1558.e7. https://doi.org/10.1016/j.jaci.2015.05.024
Lee, H.-S., Jeon, M. J., Kim, S.-O., Kim, S.-H., Lee, J.-H., Ahn, S.-J., Shin, Y., & Song, J. S. (2015). Characteristics of stem cells from human exfoliated deciduous teeth (SHED) from intact cryopreserved deciduous teeth. Cryobiology, 71(3), 374–383. https://doi.org/10.1016/j.cryobiol.2015.10.146
Evers, M. M., Schut, M. H., Pepers, B. A., Atalar, M., van Belzen, M. J., Faull, R. L., Roos, R. A., & van Roon-Mom, W. M. (2015). Making (anti-) sense out of huntingtin levels in Huntington disease. Molecular Neurodegeneration, 10(1). https://doi.org/10.1186/s13024-015-0018-7
Ranjan, R., Rani, A., Metwally, A., McGee, H. S., & Perkins, D. L. (2015). Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing. Biochemical and Biophysical Research Communications. https://doi.org/10.1016/j.bbrc.2015.12.083
Janocko, L., Althouse, A. D., Brand, R. M., Cranston, R. D., & McGowan, I. (2015). The Molecular Characterization of Intestinal Explant HIV Infection Using Polymerase Chain Reaction-Based Techniques. AIDS Research and Human Retroviruses, 31(10), 981–991. https://doi.org/10.1089/aid.2015.0165
Frank, P., Andersson, E., Pontén, M., Ekblom, B., Ekblom, M., & Sahlin, K. (2015). Strength training improves muscle aerobic capacity and glucose tolerance in elderly: Strength training in elderly. Scandinavian Journal of Medicine & Science in Sports, n/a-n/a. https://doi.org/10.1111/sms.12537
Psilander, N., Frank, P., Flockhart, M., & Sahlin, K. (2015). Adding strength to endurance training does not enhance aerobic capacity in cyclists: Concurrent training mitochondrial biogenesis. Scandinavian Journal of Medicine & Science in Sports, 25(4), e353–e359. https://doi.org/10.1111/sms.12338
Kim, S., Song, J. S., Jeon, M., Shin, D. M., Kim, S.-O., & Lee, J. H. (2015). Ectopic Hard Tissue Formation by Odonto/Osteogenically In Vitro Differentiated Human Deciduous Teeth Pulp Stem Cells. Calcified Tissue International, 97(1), 80–89. https://doi.org/10.1007/s00223-015-9989-1
Andersson, S., Sikora, P., Karlberg, M. L., Winiecka-Krusnell, J., Alm, E., Beser, J., & Arrighi, R. B. G. (2015). It’s a dirty job — A robust method for the purification and de novo genome assembly of Cryptosporidium from clinical material. Journal of Microbiological Methods, 113, 10–12. https://doi.org/10.1016/j.mimet.2015.03.018
Wang, S.-Y., Wang, H.-Y., Wang, T.-E., Wang, H.-H., Chang, W.-H., Chu, C.-H., Lin, S.-C., Yeh, H.-I., & Shih, S.-C. (2015). Delayed healing of gastric ulcer is associated with downregulation of connexin 32 in the gastric mucosa. Advances in Digestive Medicine, 2(2), 67–73. https://doi.org/10.1016/j.aidm.2015.01.004
Sebastian, R., Chau, E., Fillmore, P., Matthews, J., Price, L. A., Sidhaye, V., & Milner, S. M. (2015). Epidermal aquaporin-3 is increased in the cutaneous burn wound. Burns, 41(4), 843–847. https://doi.org/10.1016/j.burns.2014.10.033
Alves, R. D. A. M., Dane, A. D., Harms, A., Strassburg, K., Seifar, R. M., Verdijk, L. B., Kersten, S., Berger, R., Hankemeier, T., & Vreeken, R. J. (2015). Global profiling of the muscle metabolome: method optimization, validation and application to determine exercise-induced metabolic effects. Metabolomics, 11(2), 271–285. https://doi.org/10.1007/s11306-014-0701-7
Behnia, F., Parets, S. E., Kechichian, T., Yin, H., Dutta, E. H., Saade, G. R., Smith, A. K., & Menon, R. (2015). Fetal DNA methylation of autism spectrum disorders candidate genes: association with spontaneous preterm birth. American Journal of Obstetrics and Gynecology, 212(4), 533.e1-533.e9. https://doi.org/10.1016/j.ajog.2015.02.011
Jia, Y., Yu, H., Fernandes, S. M., Wei, Y., Gonzalez-Gil, A., Motari, M. G., Vajn, K., Stevens, W. W., Peters, A. T., Bochner, B. S., Kern, R. C., Schleimer, R. P., & Schnaar, R. L. (2015). Expression of ligands for Siglec-8 and Siglec-9 in human airways and airway cells. Journal of Allergy and Clinical Immunology, 135(3), 799-810.e7. https://doi.org/10.1016/j.jaci.2015.01.004
Cleland, T. P., & Vashishth, D. (2015). Bone protein extraction without demineralization using principles from hydroxyapatite chromatography. Analytical Biochemistry, 472, 62–66. https://doi.org/10.1016/j.ab.2014.12.006
Awasthi, N., Hinz, S., Brekken, R. A., Schwarz, M. A., & Schwarz, R. E. (2015). Nintedanib, a triple angiokinase inhibitor, enhances cytotoxic therapy response in pancreatic cancer. Cancer Letters, 358(1), 59–66. https://doi.org/10.1016/j.canlet.2014.12.027
McGowan, I., Janocko, L., Burneisen, S., Bhat, A., & Richardson-Harman, N. (2015). Variability of cytokine gene expression in intestinal tissue and the impact of normalization with the use of reference genes. Cytokine, 71(1), 81–88. https://doi.org/10.1016/j.cyto.2014.08.010

Non-human primates

Goedeke, L., Rotllan, N., Canfrán-Duque, A., Aranda, J. F., Ramírez, C. M., Araldi, E., Lin, C.-S., Anderson, N. N., Wagschal, A., de Cabo, R., Horton, J. D., Lasunción, M. A., Näär, A. M., Suárez, Y., & Fernández-Hernando, C. (2015). MicroRNA-148a regulates LDL receptor and ABCA1 expression to control circulating lipoprotein levels. Nature Medicine, 21(11), 1280–1289. https://doi.org/10.1038/nm.3949
Zhu, Y., Li, M., Sousa, A. M., & Šestan, N. (2014). XSAnno: a framework for building ortholog models in cross-species transcriptome comparisons. BMC Genomics, 15(1), 343. https://doi.org/10.1186/1471-2164-15-343
Ramirez, C. M., Goedeke, L., Rotllan, N., Yoon, J.-H., Cirera-Salinas, D., Mattison, J. A., Suarez, Y., de Cabo, R., Gorospe, M., & Fernandez-Hernando, C. (2013). MicroRNA 33 Regulates Glucose Metabolism. Molecular and Cellular Biology, 33(15), 2891–2902. https://doi.org/10.1128/MCB.00016-13
Palandra, J., Finelli, A., Zhu, M., Masferrer, J., & Neubert, H. (2013). Highly Specific and Sensitive Measurements of Human and Monkey Interleukin 21 Using Sequential Protein and Tryptic Peptide Immunoaffinity LC-MS/MS. Analytical Chemistry, 85(11), 5522–5529. https://doi.org/10.1021/ac4006765
Nakayama, K. H., Lee, C. C. I., Batchelder, C. A., & Tarantal, A. F. (2013). Tissue Specificity of Decellularized Rhesus Monkey Kidney and Lung Scaffolds. PLoS ONE, 8(5), e64134. https://doi.org/10.1371/journal.pone.0064134
Smith, K. M., Anthony, S. J., Switzer, W. M., Epstein, J. H., Seimon, T., Jia, H., Sanchez, M. D., Huynh, T. T., Galland, G. G., Shapiro, S. E., Sleeman, J. M., McAloose, D., Stuchin, M., Amato, G., Kolokotronis, S.-O., Lipkin, W. I., Karesh, W. B., Daszak, P., & Marano, N. (2012). Zoonotic Viruses Associated with Illegally Imported Wildlife Products. PLoS ONE, 7(1), e29505. https://doi.org/10.1371/journal.pone.0029505
Rayner, K. J., Esau, C. C., Hussain, F. N., McDaniel, A. L., Marshall, S. M., van Gils, J. M., Ray, T. D., Sheedy, F. J., Goedeke, L., Liu, X., Khatsenko, O. G., Kaimal, V., Lees, C. J., Fernandez-Hernando, C., Fisher, E. A., Temel, R. E., & Moore, K. J. (2011). Inhibition of miR-33a/b in non-human primates raises plasma HDL and lowers VLDL triglycerides. Nature, 478(7369), 404–407. https://doi.org/10.1038/nature10486
Lebold, K. M., Grant, K. A., Freeman, W. M., Wiren, K. M., Miller, G. W., Kiley, C., Leonard, S. W., & Traber, M. G. (2011). Individual Differences in Hyperlipidemia and Vitamin E Status in Response to Chronic Alcohol Self-Administration in Cynomolgus Monkeys: CHRONIC ALCOHOL SELF-ADMINISTRATION IN CYNOMOLGUS MONKEYS. Alcoholism: Clinical and Experimental Research, 35(3), 474–483. https://doi.org/10.1111/j.1530-0277.2010.01364.x

Pig

Ohana, D., Dalebout, H., Marissen, R. J., Wulff, T., Bergquist, J., Deelder, A. M., & Palmblad, M. (2016). Identification of meat products by shotgun spectral matching. Food Chemistry, 203, 28–34. https://doi.org/10.1016/j.foodchem.2016.01.138
Lei, S., Ryu, J., Wen, K., Twitchell, E., Bui, T., Ramesh, A., Weiss, M., Li, G., Samuel, H., Clark-Deener, S., Jiang, X., Lee, K., & Yuan, L. (2016). Increased and prolonged human norovirus infection in RAG2/IL2RG deficient gnotobiotic pigs with severe combined immunodeficiency. Scientific Reports, 6. https://doi.org/10.1038/srep25222
Lei, S., Samuel, H., Twitchell, E., Bui, T., Ramesh, A., Wen, K., Weiss, M., Li, G., Yang, X., Jiang, X., & Yuan, L. (2016). Enterobacter cloacae inhibits human norovirus infectivity in gnotobiotic pigs. Scientific Reports, 6. https://doi.org/10.1038/srep25017
Alves, R. D. A. M., Dane, A. D., Harms, A., Strassburg, K., Seifar, R. M., Verdijk, L. B., Kersten, S., Berger, R., Hankemeier, T., & Vreeken, R. J. (2015). Global profiling of the muscle metabolome: method optimization, validation and application to determine exercise-induced metabolic effects. Metabolomics, 11(2), 271–285. https://doi.org/10.1007/s11306-014-0701-7
Ablorh, N.-A. D., Dong, X., James, Z. M., Xiong, Q., Zhang, J., Thomas, D. D., & Karim, C. B. (2014). Synthetic Phosphopeptides Enable Quantitation of the Content and Function of the Four Phosphorylation States of Phospholamban in Cardiac Muscle. Journal of Biological Chemistry, 289(42), 29397–29405. https://doi.org/10.1074/jbc.M114.556621
Lassaletta, A. D., Elmadhun, N. Y., Burgess, T. A., Bianchi, C., Sabe, A. A., Robich, M. P., Chu, L. M., & Sellke, F. W. (2014). Microvascular Notch Signaling Is Upregulated in Response to Vascular Endothelial Growth Factor and Chronic Myocardial Ischemia. Circulation Journal, 78(3), 743–751. https://doi.org/10.1253/circj.CJ-13-0685
Lassaletta, A. D., Elmadhun, N. Y., Liu, Y., Feng, J., Burgess, T. A., Karlson, N. W., Laham, R. J., & Sellke, F. W. (2013). Ethanol Promotes Arteriogenesis and Restores Perfusion to Chronically Ischemic Myocardium. Circulation, 128(11_suppl_1), S136–S143. https://doi.org/10.1161/CIRCULATIONAHA.112.000207
Lassaletta, A. D., Chu, L. M., Elmadhun, N. Y., Robich, M. P., Hoffman, Z. G., Kim, D. J., & Sellke, F. W. (2013). Mechanism for reduced pericardial adhesion formation in hypercholesterolemic swine supplemented with alcohol. European Journal of Cardio-Thoracic Surgery, 43(5), 1058–1064. https://doi.org/10.1093/ejcts/ezs488
Mihai, D. M., Jiang, H., Blaner, W. S., Romanov, A., & Washington, I. (2013). The retina rapidly incorporates ingested C20-D₃-vitamin A in a swine model. Molecular Vision, 19, 1677–1683.
Lassaletta, A. D., Chu, L. M., Elmadhun, N. Y., Burgess, T. A., Feng, J., Robich, M. P., & Sellke, F. W. (2012). Cardioprotective effects of red wine and vodka in a model of endothelial dysfunction. Journal of Surgical Research, 178(2), 586–592. https://doi.org/10.1016/j.jss.2012.06.009
Lu, J., & Grenache, D. G. (2010). High-throughput tissue homogenization method and tissue-based quality control materials for a clinical assay of the intestinal disaccharidases. Clinica Chimica Acta, 411(9–10), 754–757. https://doi.org/10.1016/j.cca.2010.02.009

Seals & relatives

Moore, C. D., Fahlman, A., Crocker, D. E., Robbins, K. A., & Trumble, S. J. (2015). The degradation of proteins in pinniped skeletal muscle: viability of post-mortem tissue in physiological research. Conservation Physiology, 3(1), cov019–cov019. https://doi.org/10.1093/conphys/cov019
Moore, C. D., Crocker, D. E., Fahlman, A., Moore, M. J., Willoughby, D. S., Robbins, K. A., Kanatous, S. B., & Trumble, S. J. (2014). Ontogenetic changes in skeletal muscle fiber type, fiber diameter and myoglobin concentration in the Northern elephant seal (Mirounga angustirostris). Frontiers in Physiology, 5. https://doi.org/10.3389/fphys.2014.00217
Melero, M., García-Párraga, D., Corpa, J., Ortega, J., Rubio-Guerri, C., Crespo, J., Rivera-Arroyo, B., & Sánchez-Vizcaíno, J. (2014). First molecular detection and characterization of herpesvirus and poxvirus in a Pacific walrus (Odobenus rosmarus divergens). BMC Veterinary Research, 10(1), 968. https://doi.org/10.1186/s12917-014-0308-2
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